NEWS
ICIKendallTau 1.2.10
- Added the number of non-missing values used to calculate correlation in data.frame output of
cor_fast.
ICIKendallTau 1.2.9
- Fixing an issue where any
NA observations would be removed when using cor_fast and pairwise.complete.obs, instead of just those for the pairs (closes #25).
- Adding
include_only function argument to cor_fast to allow specification of which correlations to include (closes #24).
ICIKendallTau 1.2.7
- Fixing a test that fails on r-universe.
ICIKendallTau 1.2.5
- Fixed a bug where the
check_timing wasn't taking the right arguments, and wasn't actually calculating what it should.
- Added the
completeness metric to the output of ici_kt (and therefore to ici_kendalltau) (closes #23).
- Added more tests (closes #22 for now).
ICIKendallTau 1.2.2
- Fixed a bug where passing a two vector list is supposed to restrict the comparisons to just those provided, but instead did all possible pairwise comparisons between the two things and all others available.
ICIKendallTau 1.2.0
- Refactored much of
ici_kendalltau, making the code more consistent and easier to extend, as well as providing more informative error messages. Thanks to @njtierney for suggestions.
- Also refactored
kt_fast to be more consistent and use more functions internally. Note: now returns matrix or data.frame regardless of whether passing simply two vectors or a matrix input.
- Added
alternative and continuity arguments to both ici_kendalltau and kt_fast.
- Added
cor_fast to allow running many iterations of cor.test on large matrix inputs if desired, with parallel processing to speed things up.
ICIKendallTau 1.1.3
- makes
rank_order_data take a sample class argument to enable splitting out by class.
ICIKendallTau 1.1.2
- adds the
rank_order_data function to help with visualizing the pattern of missingness with respect to the rank of the rows.
- adds the
yeast_missing dataset as a more realistic dataset for running the test_left_censorship and rank_order_data.
ICIKendallTau 1.1.0
- adds the function
test_left_censorship to verify if ici_kendalltau is appropriate to use on the data or not.
ICIKendallTau 1.0.0
- Calculates correlation between columns of the matrix, not the rows.
ICIKendallTau 0.3.20
kt_fast now uses the same data.frame format for output as ici_kendalltau, but returns a matrix by default. The data.frame is useful when large amounts of comparisons are run.
ICIKendallTau 0.3.0
- Handling parallel execution differently to avoid really large matrix issues on each core.
- Introduces the
return_matrix parameter to ici_kendalltau that allows to return the results in the form of a data.frame instead of lists of matrices.
ICIKendallTau 0.2.10
- Provide the
kt_fast function that handles missing or NA values similarly to the stats::cor function, but uses our ici_kt fast function underneath.
ICIKendallTau 0.2.8
- Made all error outputs the same length as the default output but containing
NA.
- Check for the case when one of the variables in
ici_kt has all identical arguments, warns the user and returns NA.
ICIKendallTau 0.2.1
- Added new argument
include_only to ici_kendalltau that allows the user to define which of the pairwise correlations to actually do.
ICIKendallTau 0.1.17
- switched theme.
- updated installation instructions to use r-universe.
ICIKendallTau 0.1.16
- updating documentation and examples
ICIKendallTau 0.1.4
- Switched
pairwise_completeness to also use the global_na parameter.
- Oh yes, there is a function
pairwise_completeness to enable scaling by the completeness between any two samples.
ICIKendallTau 0.1.2
- Updated the API to use a single variable,
global_na that defines all the values that should be set to NA for the correlation calculation.
- This is a big API change, so we bumped the version up to 0.1.
ICIKendallTau 0.0.6
- Fixing a bug where if there are 55,000 elements in the vector, some of the match overflows from 32 bit to 64 bit, and results make no sense.
ICIKendallTau 0.0.5
- Fixed a bug where instead of returning a two element vector, it only returned a zero length value. This probably only happened when one of the entries contained all NA values, or you tried to pass "vectors" with less than two entries.
ICIKendallTau 0.0.4
- Fixing things that came up with R CMD check in the documentation. Should be all good now (I hope).
ICIKendallTau 0.0.3
- Added tests!
- Removed a bunch of code that wasn't necessary because it was using the incorrect formula's, and we have the correct version in the
ici_kt_pairs function for reference purposes.
ICIKendallTau 0.0.2
- Fixed an issue where a warning would be issued if {furrr} was not installed.
ICIKendallTau 0.0.1
- First release. It's been tested and used rather thoroughly by myself, but I'd say it's still rather alpha. Even though I use it all the time myself.
- Added a
NEWS.md file to track changes to the package.