Package: ICIKendallTau 1.2.8
Robert M Flight
ICIKendallTau: Calculates information-content-informed Kendall-tau
Provides functions for calculating information-content-informed Kendall-tau. This version of Kendall-tau allows for the inclusion of missing values.
Authors:
ICIKendallTau_1.2.8.tar.gz
ICIKendallTau_1.2.8.zip(r-4.5)ICIKendallTau_1.2.8.zip(r-4.4)ICIKendallTau_1.2.8.zip(r-4.3)
ICIKendallTau_1.2.8.tgz(r-4.5-x86_64)ICIKendallTau_1.2.8.tgz(r-4.5-arm64)ICIKendallTau_1.2.8.tgz(r-4.4-x86_64)ICIKendallTau_1.2.8.tgz(r-4.4-arm64)ICIKendallTau_1.2.8.tgz(r-4.3-x86_64)ICIKendallTau_1.2.8.tgz(r-4.3-arm64)
ICIKendallTau_1.2.8.tar.gz(r-4.5-noble)ICIKendallTau_1.2.8.tar.gz(r-4.4-noble)
ICIKendallTau_1.2.8.tgz(r-4.4-emscripten)ICIKendallTau_1.2.8.tgz(r-4.3-emscripten)
ICIKendallTau.pdf |ICIKendallTau.html✨
ICIKendallTau/json (API)
NEWS
| # Install 'ICIKendallTau' in R: |
| install.packages('ICIKendallTau', repos = c('https://moseleybioinformaticslab.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/moseleybioinformaticslab/icikendalltau/issues
Pkgdown site:https://moseleybioinformaticslab.github.io
- missing_dataset - Example Dataset With Missingness
- yeast_missing - Example RNA-Seq Dataset With Missingness
Last updated 4 months agofrom:75b8e2b2c6 (on v_1.2.8). Checks:7 OK, 4 NOTE. Indexed: yes.
| Target | Result | Latest binary |
|---|---|---|
| Doc / Vignettes | OK | Feb 16 2025 |
| R-4.5-win-x86_64 | NOTE | Feb 16 2025 |
| R-4.5-mac-x86_64 | NOTE | Feb 16 2025 |
| R-4.5-mac-aarch64 | NOTE | Feb 16 2025 |
| R-4.5-linux-x86_64 | NOTE | Feb 16 2025 |
| R-4.4-win-x86_64 | OK | Feb 16 2025 |
| R-4.4-mac-x86_64 | OK | Feb 16 2025 |
| R-4.4-mac-aarch64 | OK | Feb 16 2025 |
| R-4.3-win-x86_64 | OK | Feb 16 2025 |
| R-4.3-mac-x86_64 | OK | Feb 16 2025 |
| R-4.3-mac-aarch64 | OK | Feb 16 2025 |
Exports:add_uniform_noisecalculate_matrix_medianscor_fastcor_matrix_2_long_dfdisable_loggingenable_loggingici_kendalltauici_ktkt_fastlog_memorylog_messagelong_df_2_cor_matrixpairwise_completenessrank_order_datashow_progresstest_left_censorship
Dependencies:cligluelifecyclemagrittrpurrrRcpprlangstringistringrvctrs
Information-Content-Informed Kendall Tau Correlation
Rendered fromici-kendalltau.Rmdusingknitr::rmarkdownon Feb 16 2025.Last update: 2024-04-10
Started: 2021-05-21
Testing for Left Censorship
Rendered fromtesting-for-left-censorship.Rmdusingknitr::rmarkdownon Feb 16 2025.Last update: 2024-04-12
Started: 2024-04-10
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Add uniform noise | add_uniform_noise |
| Calculate matrix medians | calculate_matrix_medians |
| Fast correlation with test | cor_fast |
| convert matrix to data.frame | cor_matrix_2_long_df |
| turn logging off | disable_logging |
| turn logging on | enable_logging |
| Information-content-informed kendall tau | ici_kendalltau |
| Calculates ici-kendall-tau | ici_kt |
| Fast kendall tau | kt_fast |
| log memory usage | log_memory |
| log messages | log_message |
| convert data.frame to matrix | long_df_2_cor_matrix |
| Example Dataset With Missingness | missing_dataset |
| pairwise completeness | pairwise_completeness |
| Rank order row data | rank_order_data |
| turn progress on off | show_progress |
| Test for left censorship | test_left_censorship |
| Example RNA-Seq Dataset With Missingness | yeast_missing |
